Arduino ATmega1284p bootloader

I had some time today and built a bootloader shield. To test it I take a brand new 1284P and burn a bootloader on it. This is the log:

Atmega chip programmer.
Written by Nick Gammon.
Entered programming mode OK.
Signature = 0x1E 0x97 0x05
Processor = ATmega1284P
Flash memory size = 131072 bytes.
LFuse = 0x62
HFuse = 0x99
EFuse = 0xFF
Lock byte = 0xFF
Clock calibration = 0x8D
Bootloader address = 0x1FC00
Bootloader length = 508 bytes.
Type 'V' to verify, or 'G' to program the chip with the bootloader ...
Erasing chip ...
Writing bootloader ...
Committing page starting at 0x1FC00
Committing page starting at 0x1FD00
Written.
Verifying ...
No errors found.
Writing fuses ...
LFuse = 0xFF
HFuse = 0xDE
EFuse = 0xFD
Lock byte = 0xEF
Clock calibration = 0x8D
Done.
Type 'C' when ready to continue with another chip ...

I will post a log with the fuses of the other chip which I am trying to programm later.

By the way this is my bootloader shield: View Image (3,3MB)

I show this because I haven't seen anything similar.

EDIT:

This is the log of the µC we are talking about. Again, thanks for your help.

Atmega fuse calculator.
Written by Nick Gammon.
Entered programming mode OK.
Signature = 0x1E 0x97 0x05
Processor = ATmega1284P
Flash memory size = 131072
LFuse = 0xFF
HFuse = 0xDE
EFuse = 0xFD
Lock byte = 0xEF
Clock calibration = 0x4F
OCD Enable.............................. [ ]
JTAG Enable............................. [ ]
Enable Serial (ICSP) Programming........ [X]
Watchdog Timer Always On................ [ ]
Preserve EEPROM through chip erase...... [ ]
Boot into bootloader.................... [X]
Divide clock by 8....................... [ ]
Clock output............................ [ ]
Bootloader size: 1024 bytes.
Start-up time: SUT0: [ ] SUT1: [ ] (see datasheet)
Clock source: low-power crystal.
Brownout detection at: 2.7V.