Atmega 328 crystal location.

Are Resonators available as thru hole parts?

I guess so.

http://www.dipmicro.com/store/XC7-16000
http://www.dipmicro.com/store/C1K22-50

Or even less:

12 cents for both.

Little more space worth the tradeoff to me for accurate timing.
With a crystal, can write a time sketch that's good for a second a day drift.