MicroPython has been ported to Arduino Due and works very well to toggle pins and using the serial port!
Install it in the Arduino IDE as described on the page below. There is one cavet, you must disable upload verification in the IDE because it times out after 2 minutes and the upload fails.
the .ino-file in Pumbaa is a Python script instead of a C++ file as it normally is. Just edit it and voila, you have your Python sketch running on the Arduino Due!