I want to:
1) watch the input of the level switch ( if low Green LED is on)
2)when level switch goes high, A) Turn on an output for the motor (For a specified amount of time like 10 minutes)
B) turn off Green LED
3)after time has passed, turn off motor
4) Check Level switch again, if Still high A) Sound an alarm
B) Do not allow Pump to turn back on until Alarm is acknowledged(See other ideas)
C) Turn on Red LED
Thats about it.
You've virtually written your program there.
Look up State Machine and the Switch-Case construct in the Learning pages of this site.
I'd define your states as:
1) if level switch indicates low, green LED on, else change to state 2.
2)Start timer and turn on motor, turn off green LED change to state 3
(you may want to turn on a different LED to indicate the motor is on)
3)If time is up turn off motor ( and motor indicator LED) change to state 4
4)If level switch indicates low, change to state 1, else sound alarm and turn on red LED, change to state 5
5)if alarm is acknowledged, silence alarm...What then?