> I would like to upload a sketch over USB with FTDI cable. But the Arduino IDE does not list any ports but the Bluetooth ports.
Probably time to install the FTDI drivers. http://www.ftdichip.com/Drivers/VCP.htm
> I didn't know you could upload sketches over Bluetooth.
If the Bluetooth module is connected to the UART pins (0 and 1) then you upload sketches over Bluetooth the same way you do with a physical USB cable if you don't have auto-reset. You select the Bluetooth serial port, click on Upload, and press the Reset button briefly when you see the "Binary sketch size:" message.