Forgot to mention, the only ISP I have available is the Arduino ISP sketch. If there would be an usb ISP available for a reasonable/low price by which the process would perform easier or better, I would like to hear about that. If the Arduino ISP sketch, with some know-how is suitable, that would be great of course.
For instance, would it be easier to use something like this or would I have the same issues?
http://www.ebay.com/itm/New-USBtinyISP-AVR-ISP-programmer-for-Arduino-bootloader-/261097969894?pt=LH_DefaultDomain_0&hash=item3ccaa6d8e6
This topic shows both good and bad news concidering the possibly bad flashed uC's;
http://arduino.cc/forum/index.php?topic=26142.0;wap2