I did have the forethought to break out every single pin I could on the board by the way. So while I do not have access to RX0 and TX0 because they are used by the SD card I am trying to debug, I do have access to RX1 TX1 and SCK1, plus almost all the other pins besides the stuff for the SPI available.
Might there be some way to use FTDI over these other RX/TX pins?