Code that "breaks" arduino

adwsystems:
As for the direction bperrybap is heading, instead of toggling the outputs HIGH and LOW using digitalWrite(x), change the the pinMode from INPUT_PULLUP (which becomes the high output) and OUTPUT (which becomes low output). As mentioned the advantage is the built-in current limiting.

Even if you don't test for the shorts, bperrybap comments have a good advantage for your setup.

So... for example, in my code.. This:

  digitalWrite(12, HIGH); // 12 is red LED, no continuity
  digitalWrite(11, LOW);  // 11 is green LED, continuity

becomes this?:

  pinMode(12, INPUT_PULLUP); // 12 is red LED, no continuity
  pinMode(11, OUTPUT);  // 11 is green LED, continuity