EclipseArduino plug-in and 1.6.5-r5 can't upload

Hi All,

I have just installed the latest EclipseArduino and Java JRE v8

I followed through the video on the Welcome screen, which is quite outdated but I managed to figure things out and get the test sketch to compile. I click the "upload sketch" button and it does the build with no displayed errors.

I assigned the comport to the Serial Monitor and can see my old sketch running there and not the test sketch. With no errors too guide me, I am not sure what to do next.

In the Serial Monitor I can click the "Reset" button and it resets my old sketch and it runs OK again so the Serial Monitor is looking at the right port.

How do I make the Build/upload process do the same thing?

Thoughts and help?