What's that "traffic jam" of wires in the proto board, connecting the cathode of the diode? The second diagram is, frankly, a joke. Can you see that it conveys absolutely no information at all? If you showed the diode upside down, it would mean the same. All it shows really is that the diode is connected to the motor. Since the other connections are left out, it's completely meaningless.
Also, after repeated requests, you still have NOT provided a circuit diagram!!!!