Multiple LED's on separate pins, switches and functions - need guidance

Paul, I just want to say THANK YOU again for all your help.

On a side note to anyone who decides to duplicate this project, despite what the data sheet on the $3 pro mini's says, it cannot handle 12v and requires a voltage regulator or separate 5v power source. I learned this lesson the hard way. Sure glad they're cheap, and that I purchased 5 at once.