Nintendo vs Nyko nunchuck Arduino communication

Thanks for the great info. I don't think I damaged the chip. I only put the led in the pins for about 3 seconds, and I did not have any issues when just uploading the 'blink' code right now, and it worked fine. I'll try your tip about connecting the power to the 3.3v pin on the arduino. I'll reply if I have any luck with it.